Section: Dissemination

Teaching - Supervision - Juries

Teaching

• Master Biostatistics. Jointly with Montpellier 1, Montpellier 2 Universities and Agro-Montpellier.

  Yann Guédon teaches the stochastic modeling course ( http://www.agro-montpellier.fr/um2/um1/masterbiostatistique ). This involves 21h of M2 classes.

• Christophe Godin was responsible for a class of Master 2 on 'Plant modeling' with participation of Yann Guédon, Christophe Pradal, Frédéric Boudon and Christian Fournier in Montpellier SupAgro (M2 - 25h).

• Christophe Godin gave a class of Master 2 on 'Tree comparison algorithm' in the Master of Bioinformatique (M2 - 4h).

• Christophe Godin gave a class of Master 2 on 'Plant Modeling' in the module plant and animal Morphogenesis of the Master in biology at ENS-Paris (M2 - 4h).

• Etienne Farcot, Christophe Godin and Yann Guédon participated to the module iPlant in the Master of bioinformatic and biomathematics (University Cheikh Anta Diop, Dakar, Sénégal) (M2 - 12h).

• Yann Guédon gave a 8h lecture about plant architecture analysis at the state University of Londrina (Parana, Brazil)

• Christophe Pradal and Christian Fournier taught the Master class "Impact de l'architecture sur la propagation des maladies foliaires" in the module 'Démarches de modélisation' in Montpellier SupAgro (15h).

• Master Computer Science. University Montpellier 2.

  Frederic Boudon, Christophe Godin and Christophe Fiorio from LIRMM teach a course of 30h on plant modeling and computational geometry.

• Christophe Godin and Frédéric Boudon gave a 2 days training session on L-Py and plant modeling for a group of students in Ecole Préparatoire aux Erandes Ecoles.

Supervision

• PhD : Preuksakarn Chakkrit, Reconstructing Plant Architecture from 3D Laser Scanner Data, Université de Montpellier 2, 19 december 2012, F. Boudon and C. Godin.

• PhD in progress : Anaëlle Dambreville, "Determinants and modeling of mango phenology: interactions between structural and temporal components in a branching structure and temperature effect", Montpellier 2 University, F. Normand, P.E. Lauri, Y. Guedon.

• PhD in progress : Jonathan Legrand, "Hormon signaling and control of morphogenesis during flower development", ENS Lyon, P. Das, Y. Guedon.

• PhD in progress : Pierre Fernique, "Hidden transition models for the phenotyping of plant architecture in relation to environmental and genetic factors", Montpellier 2 University. Y. Guédon, J.-B. Durand.

• PhD in progress : Jean Peyhardi, "Markov and semi-Markov switching generalized linear mixed models applied to the analysis of plant architecture in relation to environmental and genetic factors", Montpellier 2 University. C. Trottier, Y. Guédon.

• PhD in progress : Maryline Lièvre, "Analysis and multiscale modeling of foliar growh in Arabidopsis thaliana in response to environmental stresses. Implication of the floral transition in the foliar expansion", Montpellier 2 University, C. Granier, Y. Guédon.

• PhD in progress : Mathilde Balduzzi, "Geometric modeling of plant canopy from 3D scanner images: Combined use of 3D information and reflected intensity for meshing", Montpellier 2 University, C. Godin, F. Tardieu.

• PhD in progress : Léo Guignard, "Segmentation, visualization and mechanical modeling of embryonic development in the ascidian", Montpellier 2 University, C. Godin, P. Lemaire.

• PhD in progress : Guillaume Garin, "Développement d’un cadre générique de modélisation du couple plante – agent pathogène dans OpenAlea et d’une méthodologie de transfert vers un Outil d’Aide à la Décision", Montpellier 2 University, B. Andrieu, C. Pradal, C. Fournier.

• PhD in progress : Jean-Philippe Bernard, "Adaptive mechanical model of early flower development based on 4D imaging", Montpellier 2 University, C. Godin, B. Gilles.

Juries

Christophe Godin participated was a referee of the theses of Romain Barillot and Wojtek Palubicki and participated to the defenses of these theses. Christophe Godin and Frédéric Boudon, co-supervising Chakkrit Preuksakarn thesis, were also part of the jury of his defense.